List of Publications
For the most updated publications list, please visit my Google Scholar page.
BOOK CHAPTERS
Yeo J, Liu ZS, Ng TY. Silica Aerogels: A Review of Molecular Dynamics Modelling and Characterization of the Structural, Thermal, and Mechanical Properties. In: Andreoni W., Yip S. (eds) Handbook of Materials Modeling. Springer, Cham, 2018.
Cheng Y, Yeo J. On the Interface between Protein and Two-Dimensional Materials: Investigating the Adsorption of Bovine Serum Albumin on Graphene. Advances in Computational Engineering Science. 2017; p. 11-15.
Ng TY, Joshi SC, Yeo J, Liu ZS. Effects of Nanoporosity on the Mechanical Properties and Applications of Aerogels in Composite Structures. Advances in Nanocomposites. 2016; 4: p. 97–126.
JOURNAL PUBLICATIONS
(*Contributed equally, †Corresponding Author)
Zhai H, Yeo J†. Computational Design of Antimicrobial Active Surfaces via Automated Bayesian Optimization. ACS Biomater Sci Eng. 2022. (Article ASAP)
Yu X*, Hu Y*, Shi H*, Sun Z, Li J, Liu H, Lyu H, Xia J, Meng J, Lu X, Yeo J†, Lu Q†, Guo C†. Molecular Design and Preparation of Protein-Based Soft Ionic Conductors with Tunable Properties. ACS Appl Mater Interfaces. 2022; 14, p. 48061–48071
Herath IS, Yeo J†. De novo functional groups designed to enhance neuronal integrin α5β1 binding using deep reinforcement learning. MRS Bulletin. 2023; 48, p. 1-9
Ritz H, Basker S, Yeo J. Improving understanding of reaction forces in free body diagrams using a paired vector object in Prairie Learn. In 2022 ASEE Annual Conference & Exposition.
Dethan JFN, Yeo J, Rhamdhani MA, Brooks GA, Swamy V†. Thermal conductivities of pristine, defective, and hydrogen encapsulated boron nitride and hybrid boron nitride – carbon nanotubes using atomistic molecular dynamics simulations. Mater Today Commun. 2022; p. 103947.
Shen X, Shi H, Wei H, Wu B, Xia Q, Yeo J, Huang W†. Engineering Natural and Recombinant Silks for Sustainable Biodevices. Front Chem. 2022; 10, p. 881028.
Zhai C, Zhang J, Zhong Y, Tao X, Wang M†, Zhu Y†, Yeo J†. Producing light, strong foam glass under a low sintering temperature with insights from molecular simulations. J. Non-Cryst. Solids. 2022; 582, p.121447.
Yu J, Zhai C, Wang M, Cai Z, Yeo J, Zhang Q, Zhao C, Lin S. Hybridly double-crosslinked carbon nanotube networks with combined strength and toughness via cooperative energy dissipation. Nanoscale. 2022; 14: p. 2434
Zhai C, Yu Y, Zhu Y, Zhang J, Zhong Y, Yeo J, Mingchao Wang. The Impact of Foaming Effects to the Physical and Mechanical Properties of Foam Glasses with Insights at a Molecular Level. Molecules. 2022; 27: p. 876
Zhai C, Zhong Y, Liu J, Zhang J, Zhu Y, Wang M, Yeo J. Customizing the Properties of Borosilicate Foam Glasses via Additions under Low Sintering Temperatures with Insights from Molecular Dynamics Simulations. J. Non-Cryst. Solids. 2022; 576: p. 121273
Li C, Wu J, Shi H, Sahoo JK, Yeo J, Kaplan DL. Fiber-Based Biopolymer Processing as a Route Towards Sustainability. Adv Mat. 2022; 34: p. 2105196
Yue K, Zhai C, Gu S, He Y, Yeo J, Zhou G. The Effect of Ionic Liquid-Based Electrolytes for Dendrite-Inhibited and Performance-Boosted Lithium Metal Batteries. Electrochim. Acta. 2022. 401: p. 139527
Martin C, Zhai C, Patten JA, Yeo J, Deravi L. Design and Production of Customizable and Highly Aligned Fibrillar Collagen Scaffolds. ACS Biomater Sci Eng. 2021. (Article ASAP)
Qiu Y, Zhai C, Chen L, Liu X, Yeo J†. Current Insights on the Diverse Structures and Functions in Bacterial Collagen-like Proteins. ACS Biomater Sci Eng. 2021. (Article ASAP)
Shi H, Zhao L, Zhai C, Yeo J†. Specific osteogenesis imperfecta-related Gly substitutions in type I collagen induce distinct structural, mechanical, and dynamic characteristics. ChemComm. 2021. 57: p. 12183. Featured on: Chemical Communications Emerging Investigators 2021
Li T, Yeo J†. Strengthening the Sustainability of Additive Manufacturing through Data-Driven Approaches and Workforce Development. Adv Intell Sys. 2021; 3: p. 2100069
Tian C, Li T, Bustillos J, Bhattacharya S, Turnham T, Yeo J†, Atieh Moridi†. Data-Driven Approaches Towards Smarter Additive Manufacturing. Adv Intell Sys. 2021; 3: p. 2100014. Featured on: Adv Intell Sys Cover Picture
Zhai C, Lin S, Wang M, Zhou H, Stanisauskis E, Cai Z, Yeo J, Oates WS. Conformational Freedom-Enhanced Optomechanical Energy Conversion Efficiency in Bulk Azo‐Polyimides. Adv Func Mater. 2021; 31: p. 2104414. Featured on: ScienceDaily, Adv Func Mater Frontispiece
Wang J*, Li T*, Cui F, Hui CY†, Yeo J†, Zehnder AT†. Metamodeling of Constitutive Model Using Gaussian Process Machine Learning. J Mech Phys Solids. 2021.
Qiu Y, Zhai C, Chen L, Liu X, Yeo J†. Current Insights on the Diverse Structures and Functions in Bacterial Collagen-like Proteins. ACS Biomater Sci Eng. 2021.
Shu T*, Zheng K*, Zhang Z*, Ren J, Wang Z, Pei Y, Xu Q, Yeo J†, Gu GX†, Ling S†. Birefringent silk fibroin hydrogel constructed via binary solvent exchange induced self-assembly. Biomacromolecules 2021; 22: p. 1955-1965
Wang M, Sun T, Wan D, Dai M, Ling S, Wang J, Liu Y, Fang Y, Xu S, Yeo J, Yu H, Liu S, Wang Q, Li J, Yang Y, Fan Z, Chen W. Solar-powered nanostructured biopolymer hygroscopic aerogels for atmospheric water harvesting. Nano Energy 2021; 80: p.105569.
Yue K, Zhai C, Gu S, He Y, Yeo J, Zhou G. Performance-Enhanced Lithium Metal Batteries through Ionic Liquid Based Electrolytes and Mechanism Research Derived by Density Functional Theory Calculations. Electrochim Acta. 2021; 368: p. 137535.
Zhai C*, Li T*, Shi H*, Yeo J†. Discovery and Design of Soft Polymeric Bio-inspired Materials with Multiscale Simulations and Artificial Intelligence. J Mat Chem B. 2020; 8(31): p. 6562-6587. Featured on: Journal of Materials Chemistry B Emerging Investigators 2020
Chen L, Bai L, Yeo J, Wei T, Chen W, Fan Z. Wood-Derived Carbon with Selectively Introduced C═O Groups toward Stable and High Capacity Anodes for Sodium Storage. ACS Appl Mater Interfaces. 2020; 12(24): p. 27499-27507.
Tavakoli MM, Azzellino G, Hempel M, Lu A-Y, Martín-Martínez FJ, Zhao J, Yeo J, Palacios T, Buehler MJ, Kong J. Synergistic Roll-to-Roll Transfer and Doping of CVD-Graphene Using Parylene for Ambient-Stable and Ultra-Lightweight Photovoltaics. Adv Funct Mater. 2020; 30(31): p. 2001924. Featured on: MIT News, Phys.org, New Atlas.
Yeo J*, Qiu Y*, Jung GS, Zhang YW, Buehler MJ, Kaplan DL. Adverse effects of Alport syndrome-related Gly missense mutations on collagen type IV: Insights from molecular simulations and experiments. Biomaterials. 2020; 240: p. 119857 (*Contributed equally)
Ang EY, Toh W, Yeo J, Lin R, Liu Z, Geethalakshmi KR, Ng TY. A Review on Low dimensional Carbon Desalination and Gas Separation Membrane Designs. J Memb Sci. 2020; 598: p. 117785
Ang EY, Ng TY, Yeo J, Lin R, Liu Z, Geethalakshmi KR. Investigations on Different Two-Dimensional Materials as Slit Membranes for Enhanced Desalination. J Memb Sci. 2020; 598: p. 117653
Barreiro DL, Moldes ZM, Yeo J, Shen S, Hawker MJ, Martín-Martínez FJ, Buehler MJ, Kaplan DL. Conductive silk-based composites using biobased carbon materials. Adv Mat. 2019; p. 1904720
Zhang N, Yeo J, Lim Y, Guan P, Zeng K, Hu X, Cheng Y. Tuning the Structure and Function of Monomeric Amyloid Beta Peptide by Curvature of Carbon Nanotubes. Carbon 2019; 153: p. 717-724
Aphinyan S, Ang EYM, Yeo J, Ng TY, Lin R, Liu Z, Geethalakshmi KR. Many-Body Dissipative Particle Dynamics Simulations of Nano-Droplet Formation in 3D Nano-Inkjet Printing. Model Simul Mater Sc. 2019; 27: p. 055005
Zhang N, Cheng Y, Hu X†, Yeo J†. Towards rational algorithmic design of collagen-based biomaterials through multiscale computational modeling. Curr Opin Chem Eng. 2019; 24: p. 79-87 (†Co-corresponding Authors)
Ang EYM, Ng TY, Yeo J, Liu ZS, Geethalakshmi KR. Carbon Nanotube Arrays as Multilayer Transverse Flow Carbon Nanotube Membrane for Efficient Desalination. J Memb Sci. 2019; 581: p. 383-392.
Yeo J*, Jung GS*, Martín-Martínez FJ*, Beem J*, Qin Z, Buehler MJ. Multiscale design of graphyne materials, from atom to structure. Adv Mater. 2019; p. 1805665 (*Contributed equally)
Barreiro DL, Yeo J, Tarakanova A, Martín-Martínez FJ, Buehler MJ. Multiscale modeling of silk and silk-based biomaterials – a review. Macromol Biosci. 2019; 19(3): p. 1800253. Artwork featured on Inside Front Cover.
Williams TL*, Senft SL*, Yeo J*, Martín-Martínez FJ, DiBona CW, Chen C-T, Martin CA, Kuzirian AM, Gomes CM, Rosenthal JC, MacManes MD, Chu F, Buehler MJ, Hanlon RT, Deravi LF. Dynamic Pigmentary and Structural Coloration within Cephalopod Chromatophore Organs. Nat Commun. 2019; 10(1): p. 1004 (*Contributed equally). Featured on: New York Times, News@Northeastern, Marine Biological Lab, Science Daily, MRC LMS Biomedical Picture of the Day.
Leong WS*, Wang H*, Yeo J, Martín-Martínez FJ, Zubair A, Shen P-C, Mao Y, Palacios T, Buehler MJ, Hong J-Y, Kong J. Paraffin-Enabled Graphene Transfer. Nat Commun. 2019; 10(1): p. 867 (*Contributed equally). Featured on: MIT News, Market Business News.
Ang EY, Ng TY, Yeo J, Liu Z, Lin R, Geethalakshmi KR. Effects of oscillating pressure on desalination performance of transverse flow CNT membrane. Desalination. 2019; 451: p. 35-44
Aphinyan S, Ang EYM, Yeo J, Ng TY, Geethalakshmi KR. Numerical Study of Surface Agglomeration of Ultra Violet-Polymeric Ink and Its Control During 3d Nano-Inkjet Printing. J Polym Sci B Polym Phys. 2018; 56(24): p. 1615-1624
Roberts EG, Rim NG, Huang W, Tarakanova A, Yeo J, Buehler MJ, Kaplan DL, Wong JY. Fabrication and characterization of recombinant Silk-Elastin-Like-Protein (SELP) fiber. Macromol Biosci. 2018; 18(12): p. 1800265
Yeo J, Huang W, Tarakanova A, Zhang YW, Kaplan DL, Buehler MJ. Unraveling the Molecular Mechanisms of Thermo-responsive Properties of Silk-Elastin-Like Proteins by Integrating Multiscale Modeling and Experiment. J Mat Chem B. 2018; 6: p. 3727-3734. Featured on: 2018 Journal of Materials Chemistry B HOT Papers.
Yeo J, Jung GS, Martín-Martínez FJ, Ling S, Gu GX, Qin Z, Buehler MJ. Materials-by-Design: Computation, Synthesis, and Characterization from Atoms to Structures. Phys Scr. 2018; 93(5): p. 053003
Yeo J, Jung GS, Tarakanova A, Martín-Martínez FJ, Qin Z, Cheng Y, Zhang YW, Buehler MJ. Multiscale modeling of keratin, collagen, elastin and related human diseases: Perspectives from atomistic to coarse-grained molecular dynamics simulations. Extreme Mechanics Letters. 2018; 20: p. 112-124
Koh LD, Yeo J, Lee YY, Ong QY, Han MY, Tee BCK. Advancing the Frontiers of Silk Fibroin Protein-based Materials for Futuristic Electronics and Clinical Wound-Healing. Mater Sci Eng C. 2018; 86: p. 151-172
Zhu Z, Ling S, Yeo J, Zhao S, Tozzi L, Buehler MJ, Omenetto F, Li C, Kaplan DL. High-strength, durable all-silk fibroin hydrogels with versatile processability toward multi-functional applications. Adv Funct Mater. 2018; p. 1704757
Jung GS, Yeo J, Tian Z, Qin Z, Buehler MJ. Unusually low and density-insensitive thermal conductivity of three-dimensional gyroid graphene. Nanoscale. 2017; 9(36): p. 13477-13484
Cheng Y, Koh LD, Wang F, Li D, Ji B, Yeo J, Guan G, Han MY, Zhang YW. Carbon Nanoscroll-Silk Crystallite Hybrid Structure with Controllable Hydration and Mechanical Properties. Nanoscale. 2017; 9(26): p. 9181-9189
Ang EYM, Ng TY, Yeo J, Lin R, Geethalakshmi KR. Nanoscale Fluid Mechanics Working Principles of Transverse Flow Carbon Nanotube Membrane for Enhanced Desalination. Int J Appl Mech. 2017; 9(3): p. 1750034
Aphinyan S, Geethalakshmi KR, Yeo J, Shakouri A, Ng TY. Numerical characterization of ultraviolet ink fluid agglomeration and the surfactant effect in nanoinkjet printing. Polymer Adv Tech. 2017; 28(9), 1057-1064
Ang EYM, Ng TY, Yeo J, Liu ZS, Geethalakshmi KR. Free-Standing Graphene Slit Membrane For Enhanced Desalination. Carbon. 2016; 110: p. 350-355
Yeo J, Cheng Y, Han YT, Zhang Y, Guan G, Zhang YW. Adsorption and Conformational Evolution of Alpha-Helical BSA Segments on Graphene: A Molecular Dynamics Study. Int J Appl Mech. 2016; 8(2): p. 1650021
Cheng Y, Koh LD, Li D, Ji B, Zhang Y, Yeo J, Guan G, Han MY, Zhang YW. Peptide–Graphene Interactions Enhance the Mechanical Properties of Silk Fibroin. ACS Appl Mater Interfaces. 2015; 7(39): p. 21787–21796
Shakouri A, Yeo J, Ng TY, Liu ZS, Taylor HK. Superlubricity-activated thinning of graphite flakes compressed by hydrogen terminated crystalline silicon substrates for exfoliating single layer graphene: a molecular dynamics study. Carbon. 2014; 80(0): p. 68-74
Yeo J, Ng TY, Liu ZS. Molecular dynamics analysis of the thermal conductivity of graphene and silicene monolayers of different lengths. J Comput Theor Nanos. 2014; 11(8): p. 1790-1796
Lei J, Liu Z, Yeo J, Ng TY. Determination of the Young's Modulus of Silica Aerogel - An Analytical-Numerical Approach. Soft Matter. 2013; 9(47): p. 11367-11373
Yeo J, Ng TY, Liu ZS. Enhanced thermal characterization of silica aerogels through molecular dynamics simulation. Modelling Simul Mater Sci Eng. 2013; 21(7): p. 075004
Ng TY, Yeo J, Liu Z. Molecular dynamics simulation of the thermal conductivity of shorts strips of graphene and silicene: a comparative study. Int J Mech Mater Des. 2013; 9(2): p. 105-114
Yeo J, Liu ZS, Ng TY. Comparing the effects of dispersed Stone–Thrower–Wales defects and double vacancies on the thermal conductivity of graphene nanoribbons. Nanotechnology. 2012; 23(38): p. 385702
Ng TY, Yeo J, Liu ZS. A molecular dynamics study of the thermal conductivity of graphene nanoribbons containing dispersed Stone–Thrower–Wales defects. Carbon. 2012; 50(13): p. 4887-4893
Ng TY, Yeo J, Liu ZS. A molecular dynamics study of the thermal conductivity of nanoporous silica aerogel, obtained through negative pressure rupturing. J Non-Cryst Solids. 2012; 358(11): p. 1350-1355
